Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917044.1_cds_XP_016466691.1_59520
CDS Infomation

[gene=LOC107789409] [db_xref=GeneID:107789409] [protein=ribonuclease III domain-containing protein RNC1, chloroplastic-like] [protein_id=XP_016466691.1] [location=complement(join(40653..40970,43070..43156,43632..43832,44653..44857,46121..46896))] [gbkey=CDS]
Sequence

ATGGCCATGGAGTTGTGTTCAACTTTCAAACCCAACTCATTTGATCTCTCCTTTTCATCC
TCATTTTCACATTTTTCTCTCCAAACCCATGTAAAAAGTCCCAATCTTGGTCCAAGATTT
CATGTTTTAGCAGTTGCAGTAGACCCAAAAGAGCTTCCTCAAAACAGTCCACAAAGACTC
CTCAAAGAATTATCAGAGCGTAAAAAAGTAGTATCCCCTAAAAGAAAAGTACCCCCAAAA
AGATTTATCCTTAAACCCCCTTTAGATGATGCGAAGTTAGCTGAAAGATTCCTTAATAGT
CCACAATTGTCTTTAAAATCATTCCCTTTATTGAGTTCTTGTTTACCTTGTTCAAGACTC
AATAATGCTGATAAAACTTGGATTGATGAGTATTTGCTTGAGGTTAAACAAGCTTTAGGG
TACCCTTTAGAGCCATCTGAAAACTTTGGGGATGAAAATCCGGCGAAACAATTTGATACA
TTGTTGTATTTAGCATTTCAACATCCTAAGTGTGAGAGGACTAACGCGAGGCACGTGAGG
TCGGGGCATTCAAGATTGGGTTTTTTAGGACAGTATGTTCTTGAATTGTGTTTATGTGAG
TTTCTCTTGCAAAGGTATCCTAGGGAGTCGCCTGGTCCGATGAGGGAAAGAGTGTATGCT
TTGATTGGGAAAAGGTATTTGCCTAAGTGGATTAAAAATGCTAGCTTGCAGAATTTGATT
TTTCCATATGATGATATGGATAAGTTGAAGAGATTGGATAGGGAACCGCCTGTCAAATCT
GTGTTCTGGGCTTTGTTTGGAGCAATATACTTGTGTTTTGGGATGCCTGAAGTTTATCGT
GTCCTATTTGAAGTGTGTGGAATGGATCCTGAGGCTGAAGATTGCCAGCCTAAATTGAGG
AGACAGTTGGAAGATGTAGACTATGTCTCTGTAGAATTTGAAGGGAGAAAGCTTAGTTGG
CAAGATGTTGCTGCTTATAAGCCTCCAGAGGATGCTCTCTTTGCACATCCAAGGGTTTTT
AGGGCATGTGTTCCACCAGGCATGCATCGGTTCCGTGGTAATGTATGGGATTATACCAGC
AGACCTCAAGTTATGCAGACATTGGGATACCCATTGGCAATGAACGATAGGATCCCTGAG
ATTACTGAAGCCAGAAATATTGAACTTGGACTTGGTTTACAGCTCGCTTTCTTGCACCCA
TCAACATACAAGTTTGAGCATCCGAGGTTTTGCTATGAGCGGCTAGAATACCTTGGCCAA
AAAATTCAGGATTTGGTAATGGCGGAAAGGTTACTTATGAAGCATCTTGATGCTCCTGGT
AGATGGTTGCAAGAGAAACACCGACGTATCTTGATGAACAAATTCTGCGGGAGATACTTG
CGAGAAAAGTATCTCCATCGCTTTATCATTTACAGCGAGGAGGTTCAGGATGCATTCGAG
CAAAACCGTAGGCTCAGGAATCCAGCAACAACTTCTGTTCAACAAGCTATTCACGGACTC
TCGTATGCTATATATGGAAAGCCGGATGTAAGACGCCTCATGTTTGAGGTTTTTGACTTT
GAGCAGATCCAACCCAAGGTGGTATGA

Peptide Sequence

PEP ID

XP_016466691.1
PEP Infomation

PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAMELCSTFKPNSFDLSFSSSFSHFSLQTHVKSPNLGPRFHVLAVAVDPKELPQNSPQRL
LKELSERKKVVSPKRKVPPKRFILKPPLDDAKLAERFLNSPQLSLKSFPLLSSCLPCSRL
NNADKTWIDEYLLEVKQALGYPLEPSENFGDENPAKQFDTLLYLAFQHPKCERTNARHVR
SGHSRLGFLGQYVLELCLCEFLLQRYPRESPGPMRERVYALIGKRYLPKWIKNASLQNLI
FPYDDMDKLKRLDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVCGMDPEAEDCQPKLR
RQLEDVDYVSVEFEGRKLSWQDVAAYKPPEDALFAHPRVFRACVPPGMHRFRGNVWDYTS
RPQVMQTLGYPLAMNDRIPEITEARNIELGLGLQLAFLHPSTYKFEHPRFCYERLEYLGQ
KIQDLVMAERLLMKHLDAPGRWLQEKHRRILMNKFCGRYLREKYLHRFIIYSEEVQDAFE
QNRRLRNPATTSVQQAIHGLSYAIYGKPDVRRLMFEVFDFEQIQPKVV

Transcript Sequence

Gene sequence data has not been registered.